WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C8.4.1 Sequence Name  W01C8.4.1
Length (nt)  1936   Chromosome Location  X: 5680330-5686158
Chromosome . Primary Identifier  X Chromosome Location . Start  5680330
Chromosome Location . End  5686158 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020920 set-20 W01C8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C8.4 W01C8.4 1578   X: 5680561-5680689

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.4.1 5680330 5686158 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234695   360   X: 5680330-5680689 Caenorhabditis elegans
Exon234697   196   X: 5680953-5681148 Caenorhabditis elegans
Exon234699   98   X: 5681209-5681306 Caenorhabditis elegans
Exon234701   194   X: 5681353-5681546 Caenorhabditis elegans
Exon234703   125   X: 5682108-5682232 Caenorhabditis elegans
Exon234705   41   X: 5682376-5682416 Caenorhabditis elegans
Exon234708   81   X: 5682464-5682544 Caenorhabditis elegans
Exon234710   157   X: 5682594-5682750 Caenorhabditis elegans
Exon234712   75   X: 5682798-5682872 Caenorhabditis elegans
Exon234714   151   X: 5683084-5683234 Caenorhabditis elegans
Exon234716   55   X: 5683282-5683336 Caenorhabditis elegans
Exon234718   126   X: 5684073-5684198 Caenorhabditis elegans
Exon234720   96   X: 5684299-5684394 Caenorhabditis elegans
Exon234722   61   X: 5684561-5684621 Caenorhabditis elegans
Exon234726   120   X: 5686039-5686158 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.4.1 5680330 5686158 -1

1 Sequence

Length
1936

1 Sequence Ontology Term

Identifier Name Description
transcript