WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41G11.4a.1 Sequence Name  C41G11.4a.1
Length (nt)  1809   Chromosome Location  X: 5738756-5743307
Chromosome . Primary Identifier  X Chromosome Location . Start  5738756
Chromosome Location . End  5743307 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41G11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016570 gnrr-4 C41G11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41G11.4a C41G11.4a 1482   X: 5739026-5739178

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.4a.1 5738756 5743307 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234864   423   X: 5738756-5739178 Caenorhabditis elegans
Exon234869   89   X: 5739613-5739701 Caenorhabditis elegans
Exon234875   114   X: 5740023-5740136 Caenorhabditis elegans
Exon234877   102   X: 5740189-5740290 Caenorhabditis elegans
Exon234881   137   X: 5740374-5740510 Caenorhabditis elegans
Exon234885   140   X: 5741107-5741246 Caenorhabditis elegans
Exon234889   87   X: 5741293-5741379 Caenorhabditis elegans
Exon234893   118   X: 5741634-5741751 Caenorhabditis elegans
Exon234897   137   X: 5741798-5741934 Caenorhabditis elegans
Exon234901   138   X: 5741982-5742119 Caenorhabditis elegans
Exon234905   133   X: 5742683-5742815 Caenorhabditis elegans
Exon234909   77   X: 5743067-5743143 Caenorhabditis elegans
Exon234914   114   X: 5743194-5743307 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41G11.4a.1 5738756 5743307 -1

1 Sequence

Length
1809

1 Sequence Ontology Term

Identifier Name Description
transcript