WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46G11.1c.1 Sequence Name  F46G11.1c.1
Length (nt)  1815   Chromosome Location  X: 5793331-5797057
Chromosome . Primary Identifier  X Chromosome Location . Start  5793331
Chromosome Location . End  5797057 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46G11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018514 twnk-1 F46G11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46G11.1c F46G11.1c 1815   X: 5793331-5793494

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46G11.1c.1 5793331 5797057 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235013   164   X: 5793331-5793494 Caenorhabditis elegans
Exon235018   70   X: 5793996-5794065 Caenorhabditis elegans
Exon235022   281   X: 5794111-5794391 Caenorhabditis elegans
Exon235026   276   X: 5794438-5794713 Caenorhabditis elegans
Exon235030   73   X: 5794850-5794922 Caenorhabditis elegans
Exon235034   111   X: 5794971-5795081 Caenorhabditis elegans
Exon235038   135   X: 5795132-5795266 Caenorhabditis elegans
Exon235041   74   X: 5795323-5795396 Caenorhabditis elegans
Exon235045   54   X: 5795487-5795540 Caenorhabditis elegans
Exon235049   133   X: 5795929-5796061 Caenorhabditis elegans
Exon235053   126   X: 5796107-5796232 Caenorhabditis elegans
Exon235057   213   X: 5796694-5796906 Caenorhabditis elegans
Exon235059   105   X: 5796953-5797057 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46G11.1c.1 5793331 5797057 1

1 Sequence

Length
1815

1 Sequence Ontology Term

Identifier Name Description
transcript