WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E10.1 Sequence Name  F49E10.1
Length (nt)  2178   Chromosome Location  X: 5897391-5897448
Chromosome . Primary Identifier  X Chromosome Location . Start  5897391
Chromosome Location . End  5897448
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E10.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46931 TBC-16 83.0 725 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00047830
WBRNAi00047831
WBRNAi00015300
WBRNAi00016201
WBRNAi00033666

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E10.1 5897391 5897448 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018639 tbc-16 F49E10.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E10.1 5897391 5897448 1
CDS:F49E10.1 5897523 5897608 1
CDS:F49E10.1 5897660 5897781 1
CDS:F49E10.1 5897830 5897872 1
CDS:F49E10.1 5898242 5898310 1
CDS:F49E10.1 5898367 5898459 1
CDS:F49E10.1 5898502 5898712 1
CDS:F49E10.1 5898757 5898945 1
CDS:F49E10.1 5898991 5899079 1
CDS:F49E10.1 5899122 5899208 1
CDS:F49E10.1 5899258 5899425 1
CDS:F49E10.1 5900200 5900480 1
CDS:F49E10.1 5900526 5900618 1
CDS:F49E10.1 5900672 5900930 1
CDS:F49E10.1 5901492 5901659 1
CDS:F49E10.1 5901743 5901868 1
CDS:F49E10.1 5901926 5901961 1

1 Sequence

Length
2178

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E10.1.1 F49E10.1.1 2427   X: 5897338-5902157