WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22F4.3.1 Sequence Name  F22F4.3.1
Length (nt)  2442   Chromosome Location  X: 5984989-5992151
Chromosome . Primary Identifier  X Chromosome Location . Start  5984989
Chromosome Location . End  5992151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002224 klp-13 F22F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22F4.3 F22F4.3 2037   X: 5985192-5985218

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F22F4.3.1 5984989 5992151 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235469   230   X: 5984989-5985218 Caenorhabditis elegans
Exon235470   81   X: 5986932-5987012 Caenorhabditis elegans
Exon235471   111   X: 5987061-5987171 Caenorhabditis elegans
Exon235472   207   X: 5987216-5987422 Caenorhabditis elegans
Exon235473   129   X: 5987842-5987970 Caenorhabditis elegans
Exon235474   93   X: 5988083-5988175 Caenorhabditis elegans
Exon235475   84   X: 5988347-5988430 Caenorhabditis elegans
Exon235476   85   X: 5988476-5988560 Caenorhabditis elegans
Exon235477   63   X: 5988659-5988721 Caenorhabditis elegans
Exon235478   113   X: 5988778-5988890 Caenorhabditis elegans
Exon235479   109   X: 5988934-5989042 Caenorhabditis elegans
Exon235480   101   X: 5989909-5990009 Caenorhabditis elegans
Exon235481   83   X: 5990066-5990148 Caenorhabditis elegans
Exon235482   148   X: 5990195-5990342 Caenorhabditis elegans
Exon235483   172   X: 5990606-5990777 Caenorhabditis elegans
Exon235484   123   X: 5990828-5990950 Caenorhabditis elegans
Exon235485   160   X: 5991019-5991178 Caenorhabditis elegans
Exon235486   101   X: 5991759-5991859 Caenorhabditis elegans
Exon235487   249   X: 5991903-5992151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F22F4.3.1 5984989 5992151 1

1 Sequence

Length
2442

1 Sequence Ontology Term

Identifier Name Description
transcript