WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.4b.1 Sequence Name  C45B2.4b.1
Length (nt)  1699   Chromosome Location  X: 6075624-6081449
Chromosome . Primary Identifier  X Chromosome Location . Start  6075624
Chromosome Location . End  6081449 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001587 lgc-58 C45B2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.4b C45B2.4b 1542   X: 6075624-6075661

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4b.1 6075624 6081449 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235625   38   X: 6075624-6075661 Caenorhabditis elegans
Exon235636   119   X: 6075707-6075825 Caenorhabditis elegans
Exon235649   227   X: 6077296-6077522 Caenorhabditis elegans
Exon235662   145   X: 6077609-6077753 Caenorhabditis elegans
Exon235675   135   X: 6077808-6077942 Caenorhabditis elegans
Exon235688   103   X: 6078300-6078402 Caenorhabditis elegans
Exon235701   159   X: 6078456-6078614 Caenorhabditis elegans
Exon235715   56   X: 6079232-6079287 Caenorhabditis elegans
Exon235728   33   X: 6079535-6079567 Caenorhabditis elegans
Exon235735   131   X: 6080026-6080156 Caenorhabditis elegans
Exon235752   84   X: 6080475-6080558 Caenorhabditis elegans
Exon235757   187   X: 6080891-6081077 Caenorhabditis elegans
Exon235781   282   X: 6081168-6081449 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.4b.1 6075624 6081449 1

1 Sequence

Length
1699

1 Sequence Ontology Term

Identifier Name Description
transcript