WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C45B2.4b Sequence Name  C45B2.4b
Length (nt)  1542   Chromosome Location  X: 6075624-6075661
Chromosome . Primary Identifier  X Chromosome Location . Start  6075624
Chromosome Location . End  6075661
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39338 LGC-58, isoform b 59.0 513 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00042518
WBRNAi00011975

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C45B2.4b 6075624 6075661 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001587 lgc-58 C45B2.4 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C45B2.4b 6075624 6075661 1
CDS:C45B2.4b 6075707 6075825 1
CDS:C45B2.4b 6077296 6077522 1
CDS:C45B2.4b 6077609 6077753 1
CDS:C45B2.4b 6077808 6077942 1
CDS:C45B2.4b 6078300 6078402 1
CDS:C45B2.4b 6078456 6078614 1
CDS:C45B2.4b 6079232 6079287 1
CDS:C45B2.4b 6079535 6079567 1
CDS:C45B2.4b 6080026 6080156 1
CDS:C45B2.4b 6080475 6080558 1
CDS:C45B2.4b 6080891 6081077 1
CDS:C45B2.4b 6081168 6081292 1

1 Sequence

Length
1542

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C45B2.4b.1 C45B2.4b.1 1699   X: 6075624-6081449