WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00195786 Gene Name  C34H3.4
Sequence Name  ? C34H3.4 Organism  Caenorhabditis elegans
Automated Description  Is affected by alh-4 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 187
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00195786

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C34H3.4 C34H3.4 187   X: 6160986-6161172
 

Other

0 CDSs

0 RNAi Result

14 Allele

Public Name
gk964260
gk963160
gk435581
gk429262
gk366532
gk686413
gk326911
gk750149
gk706708
gk674900
gk963159
gk953848
WBVar01880829
gk282236

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00195786 6160986 6161172 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_6161173..6162164   992 X: 6161173-6162164 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in alh-4(hj221) deletion allele comparing to in N2. N.A. WBPaper00061653:alh-4(hj221)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00195786 6160986 6161172 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
187

1 Sequence Ontology Term