WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13C5.1a Sequence Name  T13C5.1a
Length (nt)  1719   Chromosome Location  X: 6196988-6197016
Chromosome . Primary Identifier  X Chromosome Location . Start  6196988
Chromosome Location . End  6197016
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27206 DAF-9, isoform a 66.6 572 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00067354
WBRNAi00067938
WBRNAi00067970
WBRNAi00068134
WBRNAi00053258
WBRNAi00018669
WBRNAi00084743
WBRNAi00084744
WBRNAi00084750
WBRNAi00084749
WBRNAi00109099
WBRNAi00077531
WBRNAi00092637

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13C5.1a 6196988 6197016 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13C5.1a 6196988 6197016 1
CDS:T13C5.1a 6197303 6197381 1
CDS:T13C5.1a 6198338 6198674 1
CDS:T13C5.1a 6198728 6198784 1
CDS:T13C5.1a 6199095 6199318 1
CDS:T13C5.1a 6199367 6199504 1
CDS:T13C5.1a 6199549 6199664 1
CDS:T13C5.1a 6199714 6199812 1
CDS:T13C5.1a 6199866 6200120 1
CDS:T13C5.1a 6200172 6200452 1
CDS:T13C5.1a 6200501 6200604 1

1 Sequence

Length
1719

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13C5.1a.1 T13C5.1a.1 1999   X: 6196927-6200823