WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C5.1b.1 Sequence Name  T13C5.1b.1
Length (nt)  1674   Chromosome Location  X: 6198094-6200604
Chromosome . Primary Identifier  X Chromosome Location . Start  6198094
Chromosome Location . End  6200604 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C5.1b T13C5.1b 1674   X: 6198094-6198156

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.1b.1 6198094 6200604 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236134   63   X: 6198094-6198156 Caenorhabditis elegans
Exon236136   337   X: 6198338-6198674 Caenorhabditis elegans
Exon236139   57   X: 6198728-6198784 Caenorhabditis elegans
Exon236142   224   X: 6199095-6199318 Caenorhabditis elegans
Exon236145   138   X: 6199367-6199504 Caenorhabditis elegans
Exon236148   116   X: 6199549-6199664 Caenorhabditis elegans
Exon236151   99   X: 6199714-6199812 Caenorhabditis elegans
Exon236154   255   X: 6199866-6200120 Caenorhabditis elegans
Exon236157   281   X: 6200172-6200452 Caenorhabditis elegans
Exon236159   104   X: 6200501-6200604 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.1b.1 6198094 6200604 1

1 Sequence

Length
1674

1 Sequence Ontology Term

Identifier Name Description
transcript