WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14F11.3.1 Sequence Name  C14F11.3.1
Length (nt)  1540   Chromosome Location  X: 6226126-6230769
Chromosome . Primary Identifier  X Chromosome Location . Start  6226126
Chromosome Location . End  6230769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14F11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001803 lite-1 C14F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14F11.3 C14F11.3 1320   X: 6226278-6226379

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.3.1 6226126 6230769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236230   254   X: 6226126-6226379 Caenorhabditis elegans
Exon236231   96   X: 6226428-6226523 Caenorhabditis elegans
Exon236232   75   X: 6226575-6226649 Caenorhabditis elegans
Exon236233   99   X: 6226699-6226797 Caenorhabditis elegans
Exon236234   297   X: 6226842-6227138 Caenorhabditis elegans
Exon236235   89   X: 6227186-6227274 Caenorhabditis elegans
Exon236236   124   X: 6227974-6228097 Caenorhabditis elegans
Exon236237   61   X: 6228147-6228207 Caenorhabditis elegans
Exon236238   128   X: 6228255-6228382 Caenorhabditis elegans
Exon236239   173   X: 6228440-6228612 Caenorhabditis elegans
Exon236240   144   X: 6230626-6230769 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14F11.3.1 6226126 6230769 -1

1 Sequence

Length
1540

1 Sequence Ontology Term

Identifier Name Description
transcript