WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H6.5b.1 Sequence Name  T07H6.5b.1
Length (nt)  4186   Chromosome Location  X: 6281847-6291549
Chromosome . Primary Identifier  X Chromosome Location . Start  6281847
Chromosome Location . End  6291549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002976 lev-9 T07H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H6.5b T07H6.5b 4044   X: 6281967-6282169

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H6.5b.1 6281847 6291549 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236317   323   X: 6281847-6282169 Caenorhabditis elegans
Exon236318   254   X: 6282223-6282476 Caenorhabditis elegans
Exon236319   100   X: 6282532-6282631 Caenorhabditis elegans
Exon236320   180   X: 6283334-6283513 Caenorhabditis elegans
Exon236321   94   X: 6283555-6283648 Caenorhabditis elegans
Exon236322   84   X: 6283697-6283780 Caenorhabditis elegans
Exon236323   137   X: 6283824-6283960 Caenorhabditis elegans
Exon236324   228   X: 6284488-6284715 Caenorhabditis elegans
Exon236325   97   X: 6284759-6284855 Caenorhabditis elegans
Exon236326   146   X: 6284983-6285128 Caenorhabditis elegans
Exon236327   73   X: 6285173-6285245 Caenorhabditis elegans
Exon236328   128   X: 6285431-6285558 Caenorhabditis elegans
Exon236329   159   X: 6285602-6285760 Caenorhabditis elegans
Exon236330   198   X: 6285816-6286013 Caenorhabditis elegans
Exon236331   103   X: 6286058-6286160 Caenorhabditis elegans
Exon236335   95   X: 6286549-6286643 Caenorhabditis elegans
Exon236338   156   X: 6286689-6286844 Caenorhabditis elegans
Exon236341   159   X: 6286887-6287045 Caenorhabditis elegans
Exon236344   183   X: 6288821-6289003 Caenorhabditis elegans
Exon236347   105   X: 6289051-6289155 Caenorhabditis elegans
Exon236350   161   X: 6289200-6289360 Caenorhabditis elegans
Exon236353   259   X: 6289415-6289673 Caenorhabditis elegans
Exon236356   174   X: 6290051-6290224 Caenorhabditis elegans
Exon236359   76   X: 6290294-6290369 Caenorhabditis elegans
Exon236362   128   X: 6290422-6290549 Caenorhabditis elegans
Exon236365   183   X: 6291099-6291281 Caenorhabditis elegans
Exon236368   203   X: 6291347-6291549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H6.5b.1 6281847 6291549 -1

1 Sequence

Length
4186

1 Sequence Ontology Term

Identifier Name Description
transcript