WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03B1.7a.1 Sequence Name  C03B1.7a.1
Length (nt)  2763   Chromosome Location  X: 6341813-6345842
Chromosome . Primary Identifier  X Chromosome Location . Start  6341813
Chromosome Location . End  6345842 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03B1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015378 C03B1.7 C03B1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03B1.7a C03B1.7a 2544   X: 6341835-6341888

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.7a.1 6341813 6345842 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236525   76   X: 6341813-6341888 Caenorhabditis elegans
Exon236526   145   X: 6342123-6342267 Caenorhabditis elegans
Exon236527   176   X: 6342509-6342684 Caenorhabditis elegans
Exon236531   306   X: 6342737-6343042 Caenorhabditis elegans
Exon236534   417   X: 6343091-6343507 Caenorhabditis elegans
Exon236536   375   X: 6343552-6343926 Caenorhabditis elegans
Exon236538   60   X: 6344294-6344353 Caenorhabditis elegans
Exon236540   279   X: 6344454-6344732 Caenorhabditis elegans
Exon236542   421   X: 6344777-6345197 Caenorhabditis elegans
Exon236544   90   X: 6345240-6345329 Caenorhabditis elegans
Exon236546   56   X: 6345379-6345434 Caenorhabditis elegans
Exon236549   362   X: 6345481-6345842 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.7a.1 6341813 6345842 1

1 Sequence

Length
2763

1 Sequence Ontology Term

Identifier Name Description
transcript