WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03B1.7b.1 Sequence Name  C03B1.7b.1
Length (nt)  2173   Chromosome Location  X: 6342581-6345645
Chromosome . Primary Identifier  X Chromosome Location . Start  6342581
Chromosome Location . End  6345645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03B1.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015378 C03B1.7 C03B1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03B1.7b C03B1.7b 1968   X: 6342938-6343042

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.7b.1 6342581 6345645 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236528   33   X: 6342581-6342613 Caenorhabditis elegans
Exon236529   42   X: 6342643-6342684 Caenorhabditis elegans
Exon236530   36   X: 6342737-6342772 Caenorhabditis elegans
Exon236532   59   X: 6342790-6342848 Caenorhabditis elegans
Exon236533   140   X: 6342903-6343042 Caenorhabditis elegans
Exon236535   417   X: 6343091-6343507 Caenorhabditis elegans
Exon236537   375   X: 6343552-6343926 Caenorhabditis elegans
Exon236539   60   X: 6344294-6344353 Caenorhabditis elegans
Exon236541   279   X: 6344454-6344732 Caenorhabditis elegans
Exon236543   421   X: 6344777-6345197 Caenorhabditis elegans
Exon236545   90   X: 6345240-6345329 Caenorhabditis elegans
Exon236547   56   X: 6345379-6345434 Caenorhabditis elegans
Exon236548   165   X: 6345481-6345645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.7b.1 6342581 6345645 1

1 Sequence

Length
2173

1 Sequence Ontology Term

Identifier Name Description
transcript