WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03B1.12.1 Sequence Name  C03B1.12.1
Length (nt)  1044   Chromosome Location  X: 6376459-6377684
Chromosome . Primary Identifier  X Chromosome Location . Start  6376459
Chromosome Location . End  6377684 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03B1.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003053 lmp-1 C03B1.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03B1.12 C03B1.12 714   X: 6376759-6377016

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.12.1 6376459 6377684 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236592   558   X: 6376459-6377016 Caenorhabditis elegans
Exon236593   210   X: 6377092-6377301 Caenorhabditis elegans
Exon236594   218   X: 6377356-6377573 Caenorhabditis elegans
Exon236595   58   X: 6377627-6377684 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03B1.12.1 6376459 6377684 -1

1 Sequence

Length
1044

1 Sequence Ontology Term

Identifier Name Description
transcript