WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04E7.3.1 Sequence Name  K04E7.3.1
Length (nt)  2171   Chromosome Location  X: 6451698-6455257
Chromosome . Primary Identifier  X Chromosome Location . Start  6451698
Chromosome Location . End  6455257 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04E7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003551 nas-33 K04E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04E7.3 K04E7.3 1935   X: 6451811-6451914

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K04E7.3.1 6451698 6455257 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236747   217   X: 6451698-6451914 Caenorhabditis elegans
Exon236748   89   X: 6451964-6452052 Caenorhabditis elegans
Exon236749   154   X: 6452099-6452252 Caenorhabditis elegans
Exon236750   145   X: 6452297-6452441 Caenorhabditis elegans
Exon236751   78   X: 6452491-6452568 Caenorhabditis elegans
Exon236752   89   X: 6452975-6453063 Caenorhabditis elegans
Exon236753   120   X: 6453109-6453228 Caenorhabditis elegans
Exon236754   127   X: 6453271-6453397 Caenorhabditis elegans
Exon236755   121   X: 6453443-6453563 Caenorhabditis elegans
Exon236756   83   X: 6453607-6453689 Caenorhabditis elegans
Exon236757   67   X: 6453757-6453823 Caenorhabditis elegans
Exon236758   115   X: 6453878-6453992 Caenorhabditis elegans
Exon236759   121   X: 6454037-6454157 Caenorhabditis elegans
Exon236760   93   X: 6454202-6454294 Caenorhabditis elegans
Exon236761   114   X: 6454338-6454451 Caenorhabditis elegans
Exon236762   84   X: 6454494-6454577 Caenorhabditis elegans
Exon236763   94   X: 6454619-6454712 Caenorhabditis elegans
Exon236764   55   X: 6454866-6454920 Caenorhabditis elegans
Exon236765   205   X: 6455053-6455257 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K04E7.3.1 6451698 6455257 -1

1 Sequence

Length
2171

1 Sequence Ontology Term

Identifier Name Description
transcript