WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04E7.2.1 Sequence Name  K04E7.2.1
Length (nt)  2795   Chromosome Location  X: 6456872-6461767
Chromosome . Primary Identifier  X Chromosome Location . Start  6456872
Chromosome Location . End  6461767 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04E7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003877 pept-1 K04E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04E7.2 K04E7.2 2508   X: 6457033-6457075

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04E7.2.1 6456872 6461767 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236767   204   X: 6456872-6457075 Caenorhabditis elegans
Exon236768   156   X: 6457704-6457859 Caenorhabditis elegans
Exon236769   142   X: 6458286-6458427 Caenorhabditis elegans
Exon236770   90   X: 6458471-6458560 Caenorhabditis elegans
Exon236771   191   X: 6458774-6458964 Caenorhabditis elegans
Exon236772   78   X: 6459012-6459089 Caenorhabditis elegans
Exon236773   83   X: 6459137-6459219 Caenorhabditis elegans
Exon236774   256   X: 6459278-6459533 Caenorhabditis elegans
Exon236775   145   X: 6459783-6459927 Caenorhabditis elegans
Exon236776   82   X: 6459982-6460063 Caenorhabditis elegans
Exon236777   123   X: 6460109-6460231 Caenorhabditis elegans
Exon236778   266   X: 6460413-6460678 Caenorhabditis elegans
Exon236779   520   X: 6460730-6461249 Caenorhabditis elegans
Exon236780   459   X: 6461309-6461767 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04E7.2.1 6456872 6461767 1

1 Sequence

Length
2795

1 Sequence Ontology Term

Identifier Name Description
transcript