WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15B12.8.1 Sequence Name  C15B12.8.1
Length (nt)  1290   Chromosome Location  X: 6474264-6476645
Chromosome . Primary Identifier  X Chromosome Location . Start  6474264
Chromosome Location . End  6476645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15B12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015788 C15B12.8 C15B12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15B12.8 C15B12.8 1158   X: 6474274-6474381

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15B12.8.1 6474264 6476645 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236815   118   X: 6474264-6474381 Caenorhabditis elegans
Exon236816   149   X: 6474916-6475064 Caenorhabditis elegans
Exon236817   103   X: 6475115-6475217 Caenorhabditis elegans
Exon236818   105   X: 6475267-6475371 Caenorhabditis elegans
Exon236819   183   X: 6475416-6475598 Caenorhabditis elegans
Exon236820   156   X: 6475904-6476059 Caenorhabditis elegans
Exon236821   156   X: 6476106-6476261 Caenorhabditis elegans
Exon236822   320   X: 6476326-6476645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15B12.8.1 6474264 6476645 1

1 Sequence

Length
1290

1 Sequence Ontology Term

Identifier Name Description
transcript