WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22A3.3a.1 Sequence Name  F22A3.3a.1
Length (nt)  2033   Chromosome Location  X: 6505980-6509957
Chromosome . Primary Identifier  X Chromosome Location . Start  6505980
Chromosome Location . End  6509957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22A3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001619 glr-8 F22A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22A3.3a F22A3.3a 1470   X: 6506884-6507045

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.3a.1 6505980 6509957 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236978   381   X: 6505980-6506360 Caenorhabditis elegans
Exon236980   56   X: 6506730-6506785 Caenorhabditis elegans
Exon236982   195   X: 6506851-6507045 Caenorhabditis elegans
Exon236984   81   X: 6507096-6507176 Caenorhabditis elegans
Exon236986   104   X: 6507239-6507342 Caenorhabditis elegans
Exon236988   206   X: 6507668-6507873 Caenorhabditis elegans
Exon236990   141   X: 6507931-6508071 Caenorhabditis elegans
Exon236993   89   X: 6508117-6508205 Caenorhabditis elegans
Exon236995   85   X: 6508259-6508343 Caenorhabditis elegans
Exon236997   175   X: 6508926-6509100 Caenorhabditis elegans
Exon236999   226   X: 6509390-6509615 Caenorhabditis elegans
Exon237002   294   X: 6509664-6509957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22A3.3a.1 6505980 6509957 1

1 Sequence

Length
2033

1 Sequence Ontology Term

Identifier Name Description
transcript