WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14E8.1c.1 Sequence Name  T14E8.1c.1
Length (nt)  3698   Chromosome Location  X: 6553287-6559507
Chromosome . Primary Identifier  X Chromosome Location . Start  6553287
Chromosome Location . End  6559507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14E8.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020504 svh-2 T14E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14E8.1c T14E8.1c 3057   X: 6553316-6553489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1c.1 6553287 6559507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237067   203   X: 6553287-6553489 Caenorhabditis elegans
Exon237074   82   X: 6554127-6554208 Caenorhabditis elegans
Exon237078   109   X: 6554265-6554373 Caenorhabditis elegans
Exon237082   204   X: 6554421-6554624 Caenorhabditis elegans
Exon237086   251   X: 6554670-6554920 Caenorhabditis elegans
Exon237090   89   X: 6554968-6555056 Caenorhabditis elegans
Exon237094   216   X: 6555106-6555321 Caenorhabditis elegans
Exon237098   107   X: 6555366-6555472 Caenorhabditis elegans
Exon237102   103   X: 6555652-6555754 Caenorhabditis elegans
Exon237106   120   X: 6555802-6555921 Caenorhabditis elegans
Exon237110   189   X: 6555967-6556155 Caenorhabditis elegans
Exon237114   122   X: 6556204-6556325 Caenorhabditis elegans
Exon237118   393   X: 6556372-6556764 Caenorhabditis elegans
Exon237122   182   X: 6557008-6557189 Caenorhabditis elegans
Exon237126   253   X: 6557242-6557494 Caenorhabditis elegans
Exon237130   139   X: 6557542-6557680 Caenorhabditis elegans
Exon237134   167   X: 6557777-6557943 Caenorhabditis elegans
Exon237137   149   X: 6558499-6558647 Caenorhabditis elegans
Exon237142   620   X: 6558888-6559507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T14E8.1c.1 6553287 6559507 1

1 Sequence

Length
3698

1 Sequence Ontology Term

Identifier Name Description
transcript