WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25B8.1b.1 Sequence Name  C25B8.1b.1
Length (nt)  2517   Chromosome Location  X: 6619012-6627988
Chromosome . Primary Identifier  X Chromosome Location . Start  6619012
Chromosome Location . End  6627988 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25B8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002233 kqt-1 C25B8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25B8.1b C25B8.1b 2223   X: 6619022-6619127

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25B8.1b.1 6619012 6627988 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237299   116   X: 6619012-6619127 Caenorhabditis elegans
Exon237300   62   X: 6619185-6619246 Caenorhabditis elegans
Exon237303   97   X: 6621723-6621819 Caenorhabditis elegans
Exon237305   53   X: 6621869-6621921 Caenorhabditis elegans
Exon237307   149   X: 6622110-6622258 Caenorhabditis elegans
Exon237309   91   X: 6622312-6622402 Caenorhabditis elegans
Exon237311   127   X: 6622468-6622594 Caenorhabditis elegans
Exon237313   176   X: 6622639-6622814 Caenorhabditis elegans
Exon237317   126   X: 6623824-6623949 Caenorhabditis elegans
Exon237319   111   X: 6623998-6624108 Caenorhabditis elegans
Exon237321   182   X: 6624157-6624338 Caenorhabditis elegans
Exon237323   71   X: 6624388-6624458 Caenorhabditis elegans
Exon237325   153   X: 6624508-6624660 Caenorhabditis elegans
Exon237327   99   X: 6624897-6624995 Caenorhabditis elegans
Exon237329   296   X: 6626112-6626407 Caenorhabditis elegans
Exon237331   188   X: 6627266-6627453 Caenorhabditis elegans
Exon237332   420   X: 6627569-6627988 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25B8.1b.1 6619012 6627988 1

1 Sequence

Length
2517

1 Sequence Ontology Term

Identifier Name Description
transcript