WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K11G12.4a Sequence Name  K11G12.4a
Length (nt)  1689   Chromosome Location  X: 6719800-6719943
Chromosome . Primary Identifier  X Chromosome Location . Start  6719800
Chromosome Location . End  6719943
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11G12.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41828 SMF-1, isoform a 63.1 562 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00082079
WBRNAi00082080
WBRNAi00108000
WBRNAi00050613
WBRNAi00050614
WBRNAi00082083
WBRNAi00082085
WBRNAi00017020
WBRNAi00076571
WBRNAi00108005

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K11G12.4a 6719800 6719943 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004876 smf-1 K11G12.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:K11G12.4a 6719800 6719943 -1
CDS:K11G12.4a 6720170 6720329 -1
CDS:K11G12.4a 6720377 6720488 -1
CDS:K11G12.4a 6720557 6720794 -1
CDS:K11G12.4a 6720842 6720928 -1
CDS:K11G12.4a 6720973 6721131 -1
CDS:K11G12.4a 6721686 6721841 -1
CDS:K11G12.4a 6721890 6722028 -1
CDS:K11G12.4a 6722074 6722204 -1
CDS:K11G12.4a 6722252 6722473 -1
CDS:K11G12.4a 6722903 6723043 -1

1 Sequence

Length
1689

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K11G12.4a.1 K11G12.4a.1 1843   X: 6719669-6723066