WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E9.3a.1 Sequence Name  R03E9.3a.1
Length (nt)  3248   Chromosome Location  X: 6747296-6761738
Chromosome . Primary Identifier  X Chromosome Location . Start  6747296
Chromosome Location . End  6761738 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019844 abts-4 R03E9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E9.3a R03E9.3a 2871   X: 6747631-6747723

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3a.1 6747296 6761738 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237621   428   X: 6747296-6747723 Caenorhabditis elegans
Exon237624   95   X: 6748380-6748474 Caenorhabditis elegans
Exon237627   82   X: 6748938-6749019 Caenorhabditis elegans
Exon237631   224   X: 6751479-6751702 Caenorhabditis elegans
Exon237633   349   X: 6751836-6752184 Caenorhabditis elegans
Exon237637   93   X: 6752715-6752807 Caenorhabditis elegans
Exon237641   122   X: 6752855-6752976 Caenorhabditis elegans
Exon237645   73   X: 6753019-6753091 Caenorhabditis elegans
Exon237649   195   X: 6753138-6753332 Caenorhabditis elegans
Exon237653   149   X: 6753799-6753947 Caenorhabditis elegans
Exon237657   101   X: 6753990-6754090 Caenorhabditis elegans
Exon237661   124   X: 6754141-6754264 Caenorhabditis elegans
Exon237665   119   X: 6754556-6754674 Caenorhabditis elegans
Exon237669   62   X: 6757452-6757513 Caenorhabditis elegans
Exon237673   114   X: 6759141-6759254 Caenorhabditis elegans
Exon237677   145   X: 6759667-6759811 Caenorhabditis elegans
Exon237681   118   X: 6759857-6759974 Caenorhabditis elegans
Exon237685   459   X: 6760020-6760478 Caenorhabditis elegans
Exon237689   105   X: 6761496-6761600 Caenorhabditis elegans
Exon237695   91   X: 6761648-6761738 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3a.1 6747296 6761738 -1

1 Sequence

Length
3248

1 Sequence Ontology Term

Identifier Name Description
transcript