WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E9.3c.1 Sequence Name  R03E9.3c.1
Length (nt)  3126   Chromosome Location  X: 6747358-6761738
Chromosome . Primary Identifier  X Chromosome Location . Start  6747358
Chromosome Location . End  6761738 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019844 abts-4 R03E9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E9.3c R03E9.3c 2811   X: 6747631-6747723

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3c.1 6747358 6761738 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237622   366   X: 6747358-6747723 Caenorhabditis elegans
Exon237625   95   X: 6748380-6748474 Caenorhabditis elegans
Exon237630   246   X: 6751457-6751702 Caenorhabditis elegans
Exon237635   349   X: 6751836-6752184 Caenorhabditis elegans
Exon237639   93   X: 6752715-6752807 Caenorhabditis elegans
Exon237643   122   X: 6752855-6752976 Caenorhabditis elegans
Exon237647   73   X: 6753019-6753091 Caenorhabditis elegans
Exon237651   195   X: 6753138-6753332 Caenorhabditis elegans
Exon237655   149   X: 6753799-6753947 Caenorhabditis elegans
Exon237659   101   X: 6753990-6754090 Caenorhabditis elegans
Exon237663   124   X: 6754141-6754264 Caenorhabditis elegans
Exon237667   119   X: 6754556-6754674 Caenorhabditis elegans
Exon237671   62   X: 6757452-6757513 Caenorhabditis elegans
Exon237675   114   X: 6759141-6759254 Caenorhabditis elegans
Exon237679   145   X: 6759667-6759811 Caenorhabditis elegans
Exon237683   118   X: 6759857-6759974 Caenorhabditis elegans
Exon237687   459   X: 6760020-6760478 Caenorhabditis elegans
Exon237691   105   X: 6761496-6761600 Caenorhabditis elegans
Exon237696   91   X: 6761648-6761738 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3c.1 6747358 6761738 -1

1 Sequence

Length
3126

1 Sequence Ontology Term

Identifier Name Description
transcript