WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E9.3b.1 Sequence Name  R03E9.3b.1
Length (nt)  2652   Chromosome Location  X: 6748424-6761696
Chromosome . Primary Identifier  X Chromosome Location . Start  6748424
Chromosome Location . End  6761696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019844 abts-4 R03E9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E9.3b R03E9.3b 2652   X: 6748424-6748474

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3b.1 6748424 6761696 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237626   51   X: 6748424-6748474 Caenorhabditis elegans
Exon237632   224   X: 6751479-6751702 Caenorhabditis elegans
Exon237634   349   X: 6751836-6752184 Caenorhabditis elegans
Exon237638   93   X: 6752715-6752807 Caenorhabditis elegans
Exon237642   122   X: 6752855-6752976 Caenorhabditis elegans
Exon237646   73   X: 6753019-6753091 Caenorhabditis elegans
Exon237650   195   X: 6753138-6753332 Caenorhabditis elegans
Exon237654   149   X: 6753799-6753947 Caenorhabditis elegans
Exon237658   101   X: 6753990-6754090 Caenorhabditis elegans
Exon237662   124   X: 6754141-6754264 Caenorhabditis elegans
Exon237666   119   X: 6754556-6754674 Caenorhabditis elegans
Exon237670   62   X: 6757452-6757513 Caenorhabditis elegans
Exon237674   114   X: 6759141-6759254 Caenorhabditis elegans
Exon237678   145   X: 6759667-6759811 Caenorhabditis elegans
Exon237682   118   X: 6759857-6759974 Caenorhabditis elegans
Exon237686   459   X: 6760020-6760478 Caenorhabditis elegans
Exon237690   105   X: 6761496-6761600 Caenorhabditis elegans
Exon237693   49   X: 6761648-6761696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3b.1 6748424 6761696 -1

1 Sequence

Length
2652

1 Sequence Ontology Term

Identifier Name Description
transcript