WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E9.3d.1 Sequence Name  R03E9.3d.1
Length (nt)  2646   Chromosome Location  X: 6751434-6761696
Chromosome . Primary Identifier  X Chromosome Location . Start  6751434
Chromosome Location . End  6761696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019844 abts-4 R03E9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E9.3d R03E9.3d 2646   X: 6751434-6751702

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3d.1 6751434 6761696 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237629   269   X: 6751434-6751702 Caenorhabditis elegans
Exon237636   349   X: 6751836-6752184 Caenorhabditis elegans
Exon237640   93   X: 6752715-6752807 Caenorhabditis elegans
Exon237644   122   X: 6752855-6752976 Caenorhabditis elegans
Exon237648   73   X: 6753019-6753091 Caenorhabditis elegans
Exon237652   195   X: 6753138-6753332 Caenorhabditis elegans
Exon237656   149   X: 6753799-6753947 Caenorhabditis elegans
Exon237660   101   X: 6753990-6754090 Caenorhabditis elegans
Exon237664   124   X: 6754141-6754264 Caenorhabditis elegans
Exon237668   119   X: 6754556-6754674 Caenorhabditis elegans
Exon237672   62   X: 6757452-6757513 Caenorhabditis elegans
Exon237676   114   X: 6759141-6759254 Caenorhabditis elegans
Exon237680   145   X: 6759667-6759811 Caenorhabditis elegans
Exon237684   118   X: 6759857-6759974 Caenorhabditis elegans
Exon237688   459   X: 6760020-6760478 Caenorhabditis elegans
Exon237692   105   X: 6761496-6761600 Caenorhabditis elegans
Exon237694   49   X: 6761648-6761696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3d.1 6751434 6761696 -1

1 Sequence

Length
2646

1 Sequence Ontology Term

Identifier Name Description
transcript