WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41C6.7.1 Sequence Name  F41C6.7.1
Length (nt)  1804   Chromosome Location  X: 6881868-6885277
Chromosome . Primary Identifier  X Chromosome Location . Start  6881868
Chromosome Location . End  6885277 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41C6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018280 F41C6.7 F41C6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41C6.7 F41C6.7 1179   X: 6882493-6882576

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.7.1 6881868 6885277 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237994   709   X: 6881868-6882576 Caenorhabditis elegans
Exon237995   105   X: 6882905-6883009 Caenorhabditis elegans
Exon237996   81   X: 6883055-6883135 Caenorhabditis elegans
Exon237997   132   X: 6883179-6883310 Caenorhabditis elegans
Exon237998   109   X: 6883352-6883460 Caenorhabditis elegans
Exon237999   87   X: 6883910-6883996 Caenorhabditis elegans
Exon238000   77   X: 6884066-6884142 Caenorhabditis elegans
Exon238001   60   X: 6884190-6884249 Caenorhabditis elegans
Exon238002   105   X: 6884294-6884398 Caenorhabditis elegans
Exon238003   66   X: 6884448-6884513 Caenorhabditis elegans
Exon238004   54   X: 6884564-6884617 Caenorhabditis elegans
Exon238005   65   X: 6884662-6884726 Caenorhabditis elegans
Exon238006   154   X: 6885124-6885277 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.7.1 6881868 6885277 -1

1 Sequence

Length
1804

1 Sequence Ontology Term

Identifier Name Description
transcript