WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41C6.1.2 Sequence Name  F41C6.1.2
Length (nt)  2228   Chromosome Location  X: 6889674-6897140
Chromosome . Primary Identifier  X Chromosome Location . Start  6889674
Chromosome Location . End  6897140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41C6.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006746 unc-6 F41C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41C6.1 F41C6.1 1839   X: 6889740-6889817

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.1.2 6889674 6897140 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238010   144   X: 6889674-6889817 Caenorhabditis elegans
Exon238012   140   X: 6889865-6890004 Caenorhabditis elegans
Exon238014   541   X: 6890458-6890998 Caenorhabditis elegans
Exon238016   162   X: 6891049-6891210 Caenorhabditis elegans
Exon238018   115   X: 6891293-6891407 Caenorhabditis elegans
Exon238023   70   X: 6892516-6892585 Caenorhabditis elegans
Exon238025   119   X: 6892636-6892754 Caenorhabditis elegans
Exon238029   150   X: 6894825-6894974 Caenorhabditis elegans
Exon238031   51   X: 6895180-6895230 Caenorhabditis elegans
Exon238033   69   X: 6895337-6895405 Caenorhabditis elegans
Exon238035   189   X: 6895459-6895647 Caenorhabditis elegans
Exon238037   89   X: 6895926-6896014 Caenorhabditis elegans
Exon238038   128   X: 6896563-6896690 Caenorhabditis elegans
Exon238040   261   X: 6896880-6897140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.1.2 6889674 6897140 1

1 Sequence

Length
2228

1 Sequence Ontology Term

Identifier Name Description
transcript