WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14B8.1a.1 Sequence Name  F14B8.1a.1
Length (nt)  2966   Chromosome Location  X: 6914289-6921135
Chromosome . Primary Identifier  X Chromosome Location . Start  6914289
Chromosome Location . End  6921135 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14B8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003732 nhx-4 F14B8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14B8.1a F14B8.1a 2250   X: 6914375-6914378

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14B8.1a.1 6914289 6921135 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238060   90   X: 6914289-6914378 Caenorhabditis elegans
Exon238061   81   X: 6914943-6915023 Caenorhabditis elegans
Exon238062   109   X: 6915337-6915445 Caenorhabditis elegans
Exon238064   155   X: 6917328-6917482 Caenorhabditis elegans
Exon238066   616   X: 6917839-6918454 Caenorhabditis elegans
Exon238068   204   X: 6918569-6918772 Caenorhabditis elegans
Exon238070   116   X: 6918818-6918933 Caenorhabditis elegans
Exon238072   209   X: 6918984-6919192 Caenorhabditis elegans
Exon238074   142   X: 6919238-6919379 Caenorhabditis elegans
Exon238076   91   X: 6919428-6919518 Caenorhabditis elegans
Exon238078   245   X: 6919605-6919849 Caenorhabditis elegans
Exon238080   135   X: 6919896-6920030 Caenorhabditis elegans
Exon238082   773   X: 6920363-6921135 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14B8.1a.1 6914289 6921135 1

1 Sequence

Length
2966

1 Sequence Ontology Term

Identifier Name Description
transcript