WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14B8.7.2 Sequence Name  F14B8.7.2
Length (nt)  1776   Chromosome Location  X: 6921646-6924452
Chromosome . Primary Identifier  X Chromosome Location . Start  6921646
Chromosome Location . End  6924452 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14B8.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017449 otpl-3 F14B8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14B8.7 F14B8.7 1701   X: 6921721-6921817

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14B8.7.2 6921646 6924452 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238085   172   X: 6921646-6921817 Caenorhabditis elegans
Exon238087   158   X: 6921864-6922021 Caenorhabditis elegans
Exon238089   99   X: 6922068-6922166 Caenorhabditis elegans
Exon238091   261   X: 6922211-6922471 Caenorhabditis elegans
Exon238093   153   X: 6922518-6922670 Caenorhabditis elegans
Exon238095   167   X: 6922725-6922891 Caenorhabditis elegans
Exon238097   151   X: 6922940-6923090 Caenorhabditis elegans
Exon238099   73   X: 6923616-6923688 Caenorhabditis elegans
Exon238101   91   X: 6923741-6923831 Caenorhabditis elegans
Exon238103   190   X: 6923894-6924083 Caenorhabditis elegans
Exon238105   127   X: 6924143-6924269 Caenorhabditis elegans
Exon238107   134   X: 6924319-6924452 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14B8.7.2 6921646 6924452 -1

1 Sequence

Length
1776

1 Sequence Ontology Term

Identifier Name Description
transcript