WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14B8.5c.1 Sequence Name  F14B8.5c.1
Length (nt)  1536   Chromosome Location  X: 6925267-6927989
Chromosome . Primary Identifier  X Chromosome Location . Start  6925267
Chromosome Location . End  6927989 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14B8.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017447 F14B8.5 F14B8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14B8.5c F14B8.5c 1269   X: 6925267-6925347

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14B8.5c.1 6925267 6927989 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238112   81   X: 6925267-6925347 Caenorhabditis elegans
Exon238116   220   X: 6925630-6925849 Caenorhabditis elegans
Exon238120   90   X: 6925897-6925986 Caenorhabditis elegans
Exon238124   98   X: 6926050-6926147 Caenorhabditis elegans
Exon238128   75   X: 6926221-6926295 Caenorhabditis elegans
Exon238132   163   X: 6926389-6926551 Caenorhabditis elegans
Exon238136   191   X: 6926618-6926808 Caenorhabditis elegans
Exon238140   109   X: 6926855-6926963 Caenorhabditis elegans
Exon238144   233   X: 6927278-6927510 Caenorhabditis elegans
Exon238148   103   X: 6927558-6927660 Caenorhabditis elegans
Exon238151   173   X: 6927817-6927989 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14B8.5c.1 6925267 6927989 -1

1 Sequence

Length
1536

1 Sequence Ontology Term

Identifier Name Description
transcript