WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54D1.1 Sequence Name  C54D1.1
Length (nt)  4149   Chromosome Location  X: 7159036-7159204
Chromosome . Primary Identifier  X Chromosome Location . Start  7159036
Chromosome Location . End  7159204
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40807 PGP-10 155.5 1382 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00000548
WBRNAi00043126
WBRNAi00012375

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54D1.1 7159036 7159204 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004004 pgp-10 C54D1.1 Caenorhabditis elegans

29 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54D1.1 7159036 7159204 1
CDS:C54D1.1 7159764 7159879 1
CDS:C54D1.1 7159926 7160027 1
CDS:C54D1.1 7160074 7160205 1
CDS:C54D1.1 7160278 7160411 1
CDS:C54D1.1 7160751 7160922 1
CDS:C54D1.1 7160975 7161099 1
CDS:C54D1.1 7161148 7161229 1
CDS:C54D1.1 7161281 7161367 1
CDS:C54D1.1 7161410 7161518 1
CDS:C54D1.1 7161571 7161675 1
CDS:C54D1.1 7161726 7161913 1
CDS:C54D1.1 7161962 7162102 1
CDS:C54D1.1 7162153 7162241 1
CDS:C54D1.1 7162291 7162585 1
CDS:C54D1.1 7162877 7162993 1
CDS:C54D1.1 7163041 7163250 1
CDS:C54D1.1 7163309 7163464 1
CDS:C54D1.1 7163513 7163614 1
CDS:C54D1.1 7163677 7163742 1
CDS:C54D1.1 7163786 7164045 1
CDS:C54D1.1 7164091 7164231 1
CDS:C54D1.1 7164278 7164418 1
CDS:C54D1.1 7164470 7164629 1
CDS:C54D1.1 7164676 7164765 1
CDS:C54D1.1 7165025 7165231 1
CDS:C54D1.1 7165281 7165385 1
CDS:C54D1.1 7165427 7165637 1
CDS:C54D1.1 7165750 7165886 1

1 Sequence

Length
4149

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54D1.1.1 C54D1.1.1 4284   X: 7159036-7166021