WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B6.2.1 Sequence Name  C55B6.2.1
Length (nt)  1965   Chromosome Location  X: 7194564-7198291
Chromosome . Primary Identifier  X Chromosome Location . Start  7194564
Chromosome Location . End  7198291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001025 dnj-7 C55B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B6.2 C55B6.2 1476   X: 7194580-7194625

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B6.2.1 7194564 7198291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238764   62   X: 7194564-7194625 Caenorhabditis elegans
Exon238765   71   X: 7194676-7194746 Caenorhabditis elegans
Exon238766   168   X: 7194793-7194960 Caenorhabditis elegans
Exon238767   75   X: 7195085-7195159 Caenorhabditis elegans
Exon238768   326   X: 7195209-7195534 Caenorhabditis elegans
Exon238769   89   X: 7196235-7196323 Caenorhabditis elegans
Exon238770   255   X: 7196376-7196630 Caenorhabditis elegans
Exon238771   282   X: 7196687-7196968 Caenorhabditis elegans
Exon238772   79   X: 7197211-7197289 Caenorhabditis elegans
Exon238773   558   X: 7197734-7198291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B6.2.1 7194564 7198291 1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript