WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10A3.1b.1 Sequence Name  T10A3.1b.1
Length (nt)  4862   Chromosome Location  X: 7272319-7280301
Chromosome . Primary Identifier  X Chromosome Location . Start  7272319
Chromosome Location . End  7280301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10A3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006750 unc-10 T10A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10A3.1b T10A3.1b 4116   X: 7273167-7273176

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1b.1 7272319 7280301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239041   424   X: 7272319-7272742 Caenorhabditis elegans
Exon239047   140   X: 7272793-7272932 Caenorhabditis elegans
Exon239052   192   X: 7272985-7273176 Caenorhabditis elegans
Exon239059   154   X: 7273222-7273375 Caenorhabditis elegans
Exon239065   230   X: 7273426-7273655 Caenorhabditis elegans
Exon239071   315   X: 7273830-7274144 Caenorhabditis elegans
Exon239075   70   X: 7274318-7274387 Caenorhabditis elegans
Exon239080   412   X: 7274543-7274954 Caenorhabditis elegans
Exon239086   144   X: 7275003-7275146 Caenorhabditis elegans
Exon239092   332   X: 7275200-7275531 Caenorhabditis elegans
Exon239098   114   X: 7275624-7275737 Caenorhabditis elegans
Exon239104   128   X: 7275784-7275911 Caenorhabditis elegans
Exon239110   124   X: 7275969-7276092 Caenorhabditis elegans
Exon239116   205   X: 7276141-7276345 Caenorhabditis elegans
Exon239126   284   X: 7276445-7276728 Caenorhabditis elegans
Exon239134   173   X: 7276782-7276954 Caenorhabditis elegans
Exon239138   100   X: 7277304-7277403 Caenorhabditis elegans
Exon239144   182   X: 7277463-7277644 Caenorhabditis elegans
Exon239150   56   X: 7277692-7277747 Caenorhabditis elegans
Exon239156   89   X: 7277955-7278043 Caenorhabditis elegans
Exon239162   145   X: 7278153-7278297 Caenorhabditis elegans
Exon239168   337   X: 7278355-7278691 Caenorhabditis elegans
Exon239174   188   X: 7278805-7278992 Caenorhabditis elegans
Exon239180   71   X: 7279407-7279477 Caenorhabditis elegans
Exon239187   134   X: 7279657-7279790 Caenorhabditis elegans
Exon239193   50   X: 7279850-7279899 Caenorhabditis elegans
Exon239199   69   X: 7280233-7280301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1b.1 7272319 7280301 -1

1 Sequence

Length
4862

1 Sequence Ontology Term

Identifier Name Description
transcript