WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10A3.1e.1 Sequence Name  T10A3.1e.1
Length (nt)  4502   Chromosome Location  X: 7272321-7280301
Chromosome . Primary Identifier  X Chromosome Location . Start  7272321
Chromosome Location . End  7280301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10A3.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006750 unc-10 T10A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10A3.1e T10A3.1e 4275   X: 7272548-7272742

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1e.1 7272321 7280301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239042   422   X: 7272321-7272742 Caenorhabditis elegans
Exon239050   140   X: 7272793-7272932 Caenorhabditis elegans
Exon239056   203   X: 7272985-7273187 Caenorhabditis elegans
Exon239062   139   X: 7273237-7273375 Caenorhabditis elegans
Exon239068   230   X: 7273426-7273655 Caenorhabditis elegans
Exon239078   70   X: 7274318-7274387 Caenorhabditis elegans
Exon239083   412   X: 7274543-7274954 Caenorhabditis elegans
Exon239089   144   X: 7275003-7275146 Caenorhabditis elegans
Exon239095   332   X: 7275200-7275531 Caenorhabditis elegans
Exon239101   114   X: 7275624-7275737 Caenorhabditis elegans
Exon239107   128   X: 7275784-7275911 Caenorhabditis elegans
Exon239113   124   X: 7275969-7276092 Caenorhabditis elegans
Exon239119   205   X: 7276141-7276345 Caenorhabditis elegans
Exon239123   125   X: 7276445-7276569 Caenorhabditis elegans
Exon239129   114   X: 7276615-7276728 Caenorhabditis elegans
Exon239132   179   X: 7276776-7276954 Caenorhabditis elegans
Exon239141   100   X: 7277304-7277403 Caenorhabditis elegans
Exon239147   182   X: 7277463-7277644 Caenorhabditis elegans
Exon239153   56   X: 7277692-7277747 Caenorhabditis elegans
Exon239159   89   X: 7277955-7278043 Caenorhabditis elegans
Exon239165   145   X: 7278153-7278297 Caenorhabditis elegans
Exon239171   337   X: 7278355-7278691 Caenorhabditis elegans
Exon239177   188   X: 7278805-7278992 Caenorhabditis elegans
Exon239183   71   X: 7279407-7279477 Caenorhabditis elegans
Exon239190   134   X: 7279657-7279790 Caenorhabditis elegans
Exon239196   50   X: 7279850-7279899 Caenorhabditis elegans
Exon239202   69   X: 7280233-7280301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1e.1 7272321 7280301 -1

1 Sequence

Length
4502

1 Sequence Ontology Term

Identifier Name Description
transcript