WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10A3.1a.1 Sequence Name  T10A3.1a.1
Length (nt)  4940   Chromosome Location  X: 7272321-7280322
Chromosome . Primary Identifier  X Chromosome Location . Start  7272321
Chromosome Location . End  7280322 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10A3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006750 unc-10 T10A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10A3.1a T10A3.1a 4692   X: 7272548-7272742

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1a.1 7272321 7280322 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239043   422   X: 7272321-7272742 Caenorhabditis elegans
Exon239046   140   X: 7272793-7272932 Caenorhabditis elegans
Exon239053   203   X: 7272985-7273187 Caenorhabditis elegans
Exon239058   154   X: 7273222-7273375 Caenorhabditis elegans
Exon239064   230   X: 7273426-7273655 Caenorhabditis elegans
Exon239070   315   X: 7273830-7274144 Caenorhabditis elegans
Exon239074   70   X: 7274318-7274387 Caenorhabditis elegans
Exon239085   604   X: 7274543-7275146 Caenorhabditis elegans
Exon239091   332   X: 7275200-7275531 Caenorhabditis elegans
Exon239097   114   X: 7275624-7275737 Caenorhabditis elegans
Exon239103   128   X: 7275784-7275911 Caenorhabditis elegans
Exon239109   124   X: 7275969-7276092 Caenorhabditis elegans
Exon239115   205   X: 7276141-7276345 Caenorhabditis elegans
Exon239125   284   X: 7276445-7276728 Caenorhabditis elegans
Exon239133   173   X: 7276782-7276954 Caenorhabditis elegans
Exon239137   100   X: 7277304-7277403 Caenorhabditis elegans
Exon239143   182   X: 7277463-7277644 Caenorhabditis elegans
Exon239149   56   X: 7277692-7277747 Caenorhabditis elegans
Exon239155   89   X: 7277955-7278043 Caenorhabditis elegans
Exon239161   145   X: 7278153-7278297 Caenorhabditis elegans
Exon239167   337   X: 7278355-7278691 Caenorhabditis elegans
Exon239173   188   X: 7278805-7278992 Caenorhabditis elegans
Exon239179   71   X: 7279407-7279477 Caenorhabditis elegans
Exon239186   134   X: 7279657-7279790 Caenorhabditis elegans
Exon239192   50   X: 7279850-7279899 Caenorhabditis elegans
Exon239204   90   X: 7280233-7280322 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1a.1 7272321 7280322 -1

1 Sequence

Length
4940

1 Sequence Ontology Term

Identifier Name Description
transcript