WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10A4.5.1 Sequence Name  C10A4.5.1
Length (nt)  1429   Chromosome Location  X: 7393467-7395998
Chromosome . Primary Identifier  X Chromosome Location . Start  7393467
Chromosome Location . End  7395998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10A4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015666 gad-2 C10A4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10A4.5 C10A4.5 1107   X: 7394174-7394255

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10A4.5.1 7393467 7395998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239365   66   X: 7393467-7393532 Caenorhabditis elegans
Exon239367   108   X: 7394148-7394255 Caenorhabditis elegans
Exon239368   92   X: 7394304-7394395 Caenorhabditis elegans
Exon239370   184   X: 7394443-7394626 Caenorhabditis elegans
Exon239372   269   X: 7394670-7394938 Caenorhabditis elegans
Exon239374   75   X: 7395054-7395128 Caenorhabditis elegans
Exon239376   78   X: 7395180-7395257 Caenorhabditis elegans
Exon239378   48   X: 7395303-7395350 Caenorhabditis elegans
Exon239380   66   X: 7395396-7395461 Caenorhabditis elegans
Exon239382   87   X: 7395506-7395592 Caenorhabditis elegans
Exon239384   356   X: 7395643-7395998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10A4.5.1 7393467 7395998 1

1 Sequence

Length
1429

1 Sequence Ontology Term

Identifier Name Description
transcript