WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10A4.5.2 Sequence Name  C10A4.5.2
Length (nt)  1674   Chromosome Location  X: 7393837-7395998
Chromosome . Primary Identifier  X Chromosome Location . Start  7393837
Chromosome Location . End  7395998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10A4.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015666 gad-2 C10A4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10A4.5 C10A4.5 1107   X: 7394174-7394255

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10A4.5.2 7393837 7395998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239366   419   X: 7393837-7394255 Caenorhabditis elegans
Exon239369   92   X: 7394304-7394395 Caenorhabditis elegans
Exon239371   184   X: 7394443-7394626 Caenorhabditis elegans
Exon239373   269   X: 7394670-7394938 Caenorhabditis elegans
Exon239375   75   X: 7395054-7395128 Caenorhabditis elegans
Exon239377   78   X: 7395180-7395257 Caenorhabditis elegans
Exon239379   48   X: 7395303-7395350 Caenorhabditis elegans
Exon239381   66   X: 7395396-7395461 Caenorhabditis elegans
Exon239383   87   X: 7395506-7395592 Caenorhabditis elegans
Exon239385   356   X: 7395643-7395998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10A4.5.2 7393837 7395998 1

1 Sequence

Length
1674

1 Sequence Ontology Term

Identifier Name Description
transcript