WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10A4.4.1 Sequence Name  C10A4.4.1
Length (nt)  882   Chromosome Location  X: 7401088-7403605
Chromosome . Primary Identifier  X Chromosome Location . Start  7401088
Chromosome Location . End  7403605 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10A4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015665 C10A4.4 C10A4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10A4.4 C10A4.4 579   X: 7402175-7402311

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10A4.4.1 7401088 7403605 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239406   92   X: 7401088-7401179 Caenorhabditis elegans
Exon239408   179   X: 7402133-7402311 Caenorhabditis elegans
Exon239409   104   X: 7402361-7402464 Caenorhabditis elegans
Exon239411   261   X: 7402557-7402817 Caenorhabditis elegans
Exon239413   246   X: 7403360-7403605 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10A4.4.1 7401088 7403605 1

1 Sequence

Length
882

1 Sequence Ontology Term

Identifier Name Description
transcript