WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F27D9.5 Sequence Name  F27D9.5
Length (nt)  2175   Chromosome Location  X: 7657805-7657963
Chromosome . Primary Identifier  X Chromosome Location . Start  7657805
Chromosome Location . End  7657963
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D9.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04451 PCCA-1 79.7 724 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00045747

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F27D9.5 7657805 7657963 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017864 pcca-1 F27D9.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F27D9.5 7657805 7657963 -1
CDS:F27D9.5 7658018 7658722 -1
CDS:F27D9.5 7658778 7659065 -1
CDS:F27D9.5 7659113 7659763 -1
CDS:F27D9.5 7660505 7660704 -1
CDS:F27D9.5 7660755 7660849 -1
CDS:F27D9.5 7660902 7660978 -1

1 Sequence

Length
2175

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F27D9.5.1 F27D9.5.1 2446   X: 7657542-7660986