WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D9.8.1 Sequence Name  F27D9.8.1
Length (nt)  1684   Chromosome Location  X: 7676511-7680619
Chromosome . Primary Identifier  X Chromosome Location . Start  7676511
Chromosome Location . End  7680619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017866 stn-2 F27D9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D9.8 F27D9.8 1548   X: 7676552-7676677

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.8.1 7676511 7680619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240262   167   X: 7676511-7676677 Caenorhabditis elegans
Exon240263   120   X: 7676722-7676841 Caenorhabditis elegans
Exon240264   93   X: 7676890-7676982 Caenorhabditis elegans
Exon240265   165   X: 7677028-7677192 Caenorhabditis elegans
Exon240266   66   X: 7677238-7677303 Caenorhabditis elegans
Exon240267   126   X: 7677357-7677482 Caenorhabditis elegans
Exon240268   169   X: 7677906-7678074 Caenorhabditis elegans
Exon240269   149   X: 7678161-7678309 Caenorhabditis elegans
Exon240270   64   X: 7678364-7678427 Caenorhabditis elegans
Exon240271   97   X: 7678857-7678953 Caenorhabditis elegans
Exon240272   66   X: 7679475-7679540 Caenorhabditis elegans
Exon240273   64   X: 7679593-7679656 Caenorhabditis elegans
Exon240274   134   X: 7679702-7679835 Caenorhabditis elegans
Exon240275   73   X: 7680272-7680344 Caenorhabditis elegans
Exon240276   131   X: 7680489-7680619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.8.1 7676511 7680619 -1

1 Sequence

Length
1684

1 Sequence Ontology Term

Identifier Name Description
transcript