WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E3.7a.2 Sequence Name  K07E3.7a.2
Length (nt)  4261   Chromosome Location  X: 8089785-8098774
Chromosome . Primary Identifier  X Chromosome Location . Start  8089785
Chromosome Location . End  8098774 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E3.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019493 catp-5 K07E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E3.7a K07E3.7a 3525   X: 8090375-8090531

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K07E3.7a.2 8089785 8098774 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241374   747   X: 8089785-8090531 Caenorhabditis elegans
Exon241378   179   X: 8091334-8091512 Caenorhabditis elegans
Exon241383   213   X: 8091559-8091771 Caenorhabditis elegans
Exon241388   162   X: 8091821-8091982 Caenorhabditis elegans
Exon241393   282   X: 8092025-8092306 Caenorhabditis elegans
Exon241398   480   X: 8092354-8092833 Caenorhabditis elegans
Exon241403   105   X: 8092886-8092990 Caenorhabditis elegans
Exon241408   139   X: 8093038-8093176 Caenorhabditis elegans
Exon241413   398   X: 8093570-8093967 Caenorhabditis elegans
Exon241418   351   X: 8094018-8094368 Caenorhabditis elegans
Exon241423   255   X: 8094749-8095003 Caenorhabditis elegans
Exon241428   190   X: 8095045-8095234 Caenorhabditis elegans
Exon241433   293   X: 8095283-8095575 Caenorhabditis elegans
Exon241438   204   X: 8095627-8095830 Caenorhabditis elegans
Exon241443   152   X: 8096279-8096430 Caenorhabditis elegans
Exon241448   46   X: 8096662-8096707 Caenorhabditis elegans
Exon241454   65   X: 8098710-8098774 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K07E3.7a.2 8089785 8098774 -1

1 Sequence

Length
4261

1 Sequence Ontology Term

Identifier Name Description
transcript