WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07E3.7a Sequence Name  K07E3.7a
Length (nt)  3525   Chromosome Location  X: 8090375-8090531
Chromosome . Primary Identifier  X Chromosome Location . Start  8090375
Chromosome Location . End  8090531
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E3.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37253 CATP-5, isoform a 131.3 1174 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00050170
WBRNAi00016733
WBRNAi00016734
WBRNAi00034077
WBRNAi00113893

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K07E3.7a 8090375 8090531 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019493 catp-5 K07E3.7 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:K07E3.7a 8090375 8090531 -1
CDS:K07E3.7a 8091334 8091512 -1
CDS:K07E3.7a 8091559 8091771 -1
CDS:K07E3.7a 8091821 8091982 -1
CDS:K07E3.7a 8092025 8092306 -1
CDS:K07E3.7a 8092354 8092833 -1
CDS:K07E3.7a 8092886 8092990 -1
CDS:K07E3.7a 8093038 8093176 -1
CDS:K07E3.7a 8093570 8093967 -1
CDS:K07E3.7a 8094018 8094368 -1
CDS:K07E3.7a 8094749 8095003 -1
CDS:K07E3.7a 8095045 8095234 -1
CDS:K07E3.7a 8095283 8095575 -1
CDS:K07E3.7a 8095627 8095830 -1
CDS:K07E3.7a 8096279 8096395 -1

1 Sequence

Length
3525

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07E3.7a.4 K07E3.7a.4 4152   X: 8089785-8096432
Transcript:K07E3.7a.2 K07E3.7a.2 4261   X: 8089785-8098774
Transcript:K07E3.7a.3 K07E3.7a.3 4335   X: 8089785-8097321
Transcript:K07E3.7a.1 K07E3.7a.1 4253   X: 8089807-8098863