WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E3.7a.1 Sequence Name  K07E3.7a.1
Length (nt)  4253   Chromosome Location  X: 8089807-8098863
Chromosome . Primary Identifier  X Chromosome Location . Start  8089807
Chromosome Location . End  8098863 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E3.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019493 catp-5 K07E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E3.7a K07E3.7a 3525   X: 8090375-8090531

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K07E3.7a.1 8089807 8098863 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241375   725   X: 8089807-8090531 Caenorhabditis elegans
Exon241377   179   X: 8091334-8091512 Caenorhabditis elegans
Exon241382   213   X: 8091559-8091771 Caenorhabditis elegans
Exon241387   162   X: 8091821-8091982 Caenorhabditis elegans
Exon241392   282   X: 8092025-8092306 Caenorhabditis elegans
Exon241397   480   X: 8092354-8092833 Caenorhabditis elegans
Exon241402   105   X: 8092886-8092990 Caenorhabditis elegans
Exon241407   139   X: 8093038-8093176 Caenorhabditis elegans
Exon241412   398   X: 8093570-8093967 Caenorhabditis elegans
Exon241417   351   X: 8094018-8094368 Caenorhabditis elegans
Exon241422   255   X: 8094749-8095003 Caenorhabditis elegans
Exon241427   190   X: 8095045-8095234 Caenorhabditis elegans
Exon241432   293   X: 8095283-8095575 Caenorhabditis elegans
Exon241437   204   X: 8095627-8095830 Caenorhabditis elegans
Exon241442   152   X: 8096279-8096430 Caenorhabditis elegans
Exon241447   46   X: 8096662-8096707 Caenorhabditis elegans
Exon241455   79   X: 8098785-8098863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K07E3.7a.1 8089807 8098863 -1

1 Sequence

Length
4253

1 Sequence Ontology Term

Identifier Name Description
transcript