WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F1.1c.1 Sequence Name  F08F1.1c.1
Length (nt)  1916   Chromosome Location  X: 8432661-8437344
Chromosome . Primary Identifier  X Chromosome Location . Start  8432661
Chromosome Location . End  8437344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F1.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002195 kin-9 F08F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F1.1c F08F1.1c 1758   X: 8432694-8432807

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.1c.1 8432661 8437344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242162   147   X: 8432661-8432807 Caenorhabditis elegans
Exon242165   141   X: 8433013-8433153 Caenorhabditis elegans
Exon242167   186   X: 8433291-8433476 Caenorhabditis elegans
Exon242168   90   X: 8434300-8434389 Caenorhabditis elegans
Exon242172   248   X: 8434910-8435157 Caenorhabditis elegans
Exon242175   223   X: 8435636-8435858 Caenorhabditis elegans
Exon242178   156   X: 8435909-8436064 Caenorhabditis elegans
Exon242181   75   X: 8436112-8436186 Caenorhabditis elegans
Exon242184   209   X: 8436232-8436440 Caenorhabditis elegans
Exon242187   138   X: 8436489-8436626 Caenorhabditis elegans
Exon242190   303   X: 8437042-8437344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F1.1c.1 8432661 8437344 1

1 Sequence

Length
1916

1 Sequence Ontology Term

Identifier Name Description
transcript