WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16F9.5.1 Sequence Name  F16F9.5.1
Length (nt)  2495   Chromosome Location  X: 8465760-8470314
Chromosome . Primary Identifier  X Chromosome Location . Start  8465760
Chromosome Location . End  8470314 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16F9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003174 mec-10 F16F9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16F9.5 F16F9.5 2175   X: 8466006-8466179

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16F9.5.1 8465760 8470314 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242291   420   X: 8465760-8466179 Caenorhabditis elegans
Exon242292   76   X: 8466268-8466343 Caenorhabditis elegans
Exon242293   129   X: 8466391-8466519 Caenorhabditis elegans
Exon242294   176   X: 8466737-8466912 Caenorhabditis elegans
Exon242295   96   X: 8467070-8467165 Caenorhabditis elegans
Exon242296   161   X: 8467227-8467387 Caenorhabditis elegans
Exon242297   101   X: 8467653-8467753 Caenorhabditis elegans
Exon242298   75   X: 8467797-8467871 Caenorhabditis elegans
Exon242299   83   X: 8467922-8468004 Caenorhabditis elegans
Exon242300   93   X: 8468054-8468146 Caenorhabditis elegans
Exon242301   77   X: 8468422-8468498 Caenorhabditis elegans
Exon242302   70   X: 8468656-8468725 Caenorhabditis elegans
Exon242303   297   X: 8468829-8469125 Caenorhabditis elegans
Exon242304   83   X: 8469176-8469258 Caenorhabditis elegans
Exon242305   122   X: 8469464-8469585 Caenorhabditis elegans
Exon242306   93   X: 8469832-8469924 Caenorhabditis elegans
Exon242307   343   X: 8469972-8470314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16F9.5.1 8465760 8470314 -1

1 Sequence

Length
2495

1 Sequence Ontology Term

Identifier Name Description
transcript