WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G8AL.10a Sequence Name  Y48G8AL.10a
Length (nt)  3738   Chromosome Location  I: 1136515-1136742
Chromosome . Primary Identifier  I Chromosome Location . Start  1136515
Chromosome Location . End  1136742
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49146 ZNF-236, isoform a 143.5 1245 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056961
WBRNAi00056973
WBRNAi00082879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AL.10a 1136515 1136742 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021689 znf-236 Y48G8AL.10 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AL.10a 1136515 1136742 -1
CDS:Y48G8AL.10a 1137812 1138141 -1
CDS:Y48G8AL.10a 1140158 1140268 -1
CDS:Y48G8AL.10a 1140803 1141031 -1
CDS:Y48G8AL.10a 1142085 1142298 -1
CDS:Y48G8AL.10a 1143349 1143539 -1
CDS:Y48G8AL.10a 1145715 1145855 -1
CDS:Y48G8AL.10a 1147087 1147585 -1
CDS:Y48G8AL.10a 1149906 1150596 -1
CDS:Y48G8AL.10a 1152123 1152280 -1
CDS:Y48G8AL.10a 1152634 1152812 -1
CDS:Y48G8AL.10a 1152878 1153008 -1
CDS:Y48G8AL.10a 1153748 1154383 -1

1 Sequence

Length
3738

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G8AL.10a.1 Y48G8AL.10a.1 3892   I: 1136366-1154388