WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04E5.10.1 Sequence Name  R04E5.10.1
Length (nt)  1927   Chromosome Location  X: 8820703-8824448
Chromosome . Primary Identifier  X Chromosome Location . Start  8820703
Chromosome Location . End  8824448 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04E5.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002057 ifd-1 R04E5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04E5.10 R04E5.10 1728   X: 8820892-8820930

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04E5.10.1 8820703 8824448 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242943   228   X: 8820703-8820930 Caenorhabditis elegans
Exon242944   111   X: 8820999-8821109 Caenorhabditis elegans
Exon242945   156   X: 8821165-8821320 Caenorhabditis elegans
Exon242946   101   X: 8821369-8821469 Caenorhabditis elegans
Exon242947   163   X: 8822129-8822291 Caenorhabditis elegans
Exon242948   165   X: 8822337-8822501 Caenorhabditis elegans
Exon242949   69   X: 8822545-8822613 Caenorhabditis elegans
Exon242950   502   X: 8822661-8823162 Caenorhabditis elegans
Exon242951   98   X: 8823212-8823309 Caenorhabditis elegans
Exon242952   114   X: 8823356-8823469 Caenorhabditis elegans
Exon242953   220   X: 8824229-8824448 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04E5.10.1 8820703 8824448 -1

1 Sequence

Length
1927

1 Sequence Ontology Term

Identifier Name Description
transcript