WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R04E5.10 Sequence Name  R04E5.10
Length (nt)  1728   Chromosome Location  X: 8820892-8820930
Chromosome . Primary Identifier  X Chromosome Location . Start  8820892
Chromosome Location . End  8820930
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04E5.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30100 IFD-1 66.7 575 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00098346
WBRNAi00082908
WBRNAi00051244
WBRNAi00034584
WBRNAi00017408
WBRNAi00007222
WBRNAi00062653
WBRNAi00062654
WBRNAi00098349
WBRNAi00113715
WBRNAi00062659
WBRNAi00062660
WBRNAi00113711
WBRNAi00112379

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R04E5.10 8820892 8820930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002057 ifd-1 R04E5.10 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:R04E5.10 8820892 8820930 -1
CDS:R04E5.10 8820999 8821109 -1
CDS:R04E5.10 8821165 8821320 -1
CDS:R04E5.10 8821369 8821469 -1
CDS:R04E5.10 8822129 8822291 -1
CDS:R04E5.10 8822337 8822501 -1
CDS:R04E5.10 8822545 8822613 -1
CDS:R04E5.10 8822661 8823162 -1
CDS:R04E5.10 8823212 8823309 -1
CDS:R04E5.10 8823356 8823469 -1
CDS:R04E5.10 8824229 8824438 -1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R04E5.10.1 R04E5.10.1 1927   X: 8820703-8824448