WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E2.7.1 Sequence Name  C06E2.7.1
Length (nt)  796   Chromosome Location  X: 8867603-8869162
Chromosome . Primary Identifier  X Chromosome Location . Start  8867603
Chromosome Location . End  8869162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006717 ubc-22 C06E2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E2.7 C06E2.7 549   X: 8867818-8867910

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06E2.7.1 8867603 8869162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243090   308   X: 8867603-8867910 Caenorhabditis elegans
Exon243091   108   X: 8868008-8868115 Caenorhabditis elegans
Exon243092   79   X: 8868554-8868632 Caenorhabditis elegans
Exon243093   77   X: 8868683-8868759 Caenorhabditis elegans
Exon243094   96   X: 8868806-8868901 Caenorhabditis elegans
Exon243095   128   X: 8869035-8869162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06E2.7.1 8867603 8869162 -1

1 Sequence

Length
796

1 Sequence Ontology Term

Identifier Name Description
transcript